Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_2937Hypothetical protein. (140 aa)    
Predicted Functional Partners:
Lwal_2936
Hypothetical protein.
 
     0.864
AlaS_2
alanyl-tRNA synthetase.
 
     0.841
Lwal_1602
Serine/threonine protein kinase.
  
     0.762
Lwal_1714
Putative aminoglycoside phosphotransferase.
 
     0.754
Lwal_1565
RDD family protein.
  
     0.723
Lwal_2859
LuxR family transcriptional regulator.
  
     0.722
Lwal_1710
Protein kinase domain protein.
  
     0.721
Lwal_2886
Phosphotransferase enzyme family protein.
  
     0.712
Lwal_3329
Trypsin.
  
     0.707
Lwal_1722
GNAT family acetyltransferase.
  
     0.698
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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