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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lasBClass 4 metalloprotease; Extracellular zinc metalloprotease. (554 aa)    
Predicted Functional Partners:
proA
Zinc metalloproteinase precursor; Extracellular zinc metalloprotease.
  
  
 
0.926
Lwal_3185
NG,NG-dimethylarginine dimethylaminohydrolase.
       0.542
Iap
Aminopeptidase.
 
  
 0.450
Lwal_2329
Leucine aminopeptidase.
 
  
 0.439
Lwal_2032
Aminopeptidase.
 
  
 0.405
iolD
Myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
       0.400
iolCB
IolC/IolB transferase kinase protein.
       0.400
iolG_2
Myo-inositol-2-dehydrogenase.
       0.400
CsbC
Sugar-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.400
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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