STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwal_3192Hypothetical protein; Alpha-2-macroglobulin family N-terminal region. (1920 aa)    
Predicted Functional Partners:
PbpD
Penicillin binding protein 1C, peptidoglycan biosynthesis.
   
 0.983
Lwal_1890
Hypothetical protein.
  
    0.560
nrdR
NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
    
   0.539
Lwal_2492
IcmF.
  
    0.526
Lwal_0645
Putative dioxygenase; Belongs to the MEMO1 family.
       0.497
iraA
Small-molecule methyltransferase IraA.
  
     0.474
ProQ_1
ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
     0.451
Lwal_2642
Hypothetical protein.
  
  
 0.448
Lwal_2493
IcmH (DotU).
  
    0.431
Lwal_2103
Hypothetical protein.
  
     0.420
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.