Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KOH24626.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)    
Predicted Functional Partners:
KOH24627.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
KOH24625.1
Peptidase M3; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
KOH24632.1
Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
KOH24636.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
djlA
Molecular chaperone DnaJ; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.
       0.528
KOH24621.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.527
KOH24628.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.478
KOH21007.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.430
KOH19517.1
LPS biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.419
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
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