Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mdtLMultidrug transporter; Confers resistance to chloramphenicol; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
KOH24862.1
Transcriptional regulator; Involved in anaerobic NO protection; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.939
rarD
Chloramphenical resistance permease RarD; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.760
rarD-2
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.760
KOH24320.1
Class A beta-lactamase; Hydrolyzes the beta-lactam bond in antibiotics such as the penicillins and cephalosporins; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.752
KOH21252.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.673
KOH18224.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.664
KOH24637.1
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.616
KOH18525.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.574
KsgA
Ribosomal RNA small subunit methyltransferase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
  
 0.571
mrdA
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.564
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.