node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KOH23963.1 | SecE | ACZ92_03100 | ACZ92_03080 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.982 |
KOH23963.1 | nusG | ACZ92_03100 | ACZ92_03085 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription antiterminator NusG; Participates in transcription elongation, termination and antitermination. | 0.985 |
KOH23963.1 | rplA | ACZ92_03100 | ACZ92_03095 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL1 family. | 0.999 |
KOH23963.1 | rplB | ACZ92_03100 | ACZ92_14580 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
KOH23963.1 | rplC | ACZ92_03100 | ACZ92_14565 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.997 |
KOH23963.1 | rplF | ACZ92_03100 | ACZ92_14640 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.997 |
KOH23963.1 | rplK | ACZ92_03100 | ACZ92_03090 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.995 |
KOH23963.1 | rplL | ACZ92_03100 | ACZ92_03105 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.996 |
KOH23963.1 | rpoB | ACZ92_03100 | ACZ92_03110 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
KOH23963.1 | rpsJ | ACZ92_03100 | ACZ92_14560 | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S10; NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
SecE | KOH23963.1 | ACZ92_03080 | ACZ92_03100 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.982 |
SecE | nusG | ACZ92_03080 | ACZ92_03085 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription antiterminator NusG; Participates in transcription elongation, termination and antitermination. | 0.995 |
SecE | rplA | ACZ92_03080 | ACZ92_03095 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL1 family. | 0.986 |
SecE | rplB | ACZ92_03080 | ACZ92_14580 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.954 |
SecE | rplC | ACZ92_03080 | ACZ92_14565 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.962 |
SecE | rplF | ACZ92_03080 | ACZ92_14640 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.954 |
SecE | rplK | ACZ92_03080 | ACZ92_03090 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.996 |
SecE | rplL | ACZ92_03080 | ACZ92_03105 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.912 |
SecE | rpoB | ACZ92_03080 | ACZ92_03110 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.674 |
SecE | rpsJ | ACZ92_03080 | ACZ92_14560 | Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S10; NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.957 |