Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KOH22433.1CreA; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)    
Predicted Functional Partners:
KOH22432.1
Guanosine kinase; Catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.750
KOH22434.1
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.721
KOH18253.1
DedD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.660
KOH21129.1
Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.628
KOH22436.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.623
KOH18283.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
      
 0.489
KOH19327.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.474
KOH19696.1
Cell division protein FtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.441
KOH17780.1
Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
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