STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH21942.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
tusD
Sulfur transfer complex subunit TusD; In Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.923
tusC
Sulfur relay protein TusC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrF/TusC family.
  
    0.808
dsrH
Sulfur relay protein TusB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.801
KOH21943.1
Peptidylprolyl isomerase; Rotamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
KOH18242.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.471
KOH20650.1
Has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.455
KOH17938.1
Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.455
slyX
Protein SlyX-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SlyX family.
       0.418
KOH17997.1
Septum formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.401
KOH17388.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.401
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.