STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kefBPotassium transporter KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. (598 aa)    
Predicted Functional Partners:
KOH22130.1
Potassium transporter KefG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.974
KOH21947.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.818
flgG
Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.745
flgG-2
Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.745
KOH24670.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.682
KOH22004.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.682
KOH21082.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.682
KOH18761.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.682
KOH17262.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.682
KOH17458.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.682
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.