| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOH18485.1 | KOH19453.1 | ACZ92_20435 | ACZ92_14610 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KOH18485.1 | KOH19468.1 | ACZ92_20435 | ACZ92_14685 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| KOH18485.1 | KOH21365.1 | ACZ92_20435 | ACZ92_11805 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| KOH18485.1 | KOH21560.1 | ACZ92_20435 | ACZ92_09000 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | ATP-dependent helicase HrpA; Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
| KOH18485.1 | KOH24717.1 | ACZ92_20435 | ACZ92_00910 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.801 |
| KOH18485.1 | rpmD | ACZ92_20435 | ACZ92_14655 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| KOH18485.1 | rpsA | ACZ92_20435 | ACZ92_18380 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.982 |
| KOH18485.1 | rpsE | ACZ92_20435 | ACZ92_14650 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.996 |
| KOH18485.1 | rpsG | ACZ92_20435 | ACZ92_07880 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.996 |
| KOH18485.1 | rpsK | ACZ92_20435 | ACZ92_14680 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.996 |
| KOH19453.1 | KOH18485.1 | ACZ92_14610 | ACZ92_20435 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.999 |
| KOH19453.1 | KOH19468.1 | ACZ92_14610 | ACZ92_14685 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KOH19453.1 | KOH21365.1 | ACZ92_14610 | ACZ92_11805 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| KOH19453.1 | KOH21560.1 | ACZ92_14610 | ACZ92_09000 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase HrpA; Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
| KOH19453.1 | KOH24717.1 | ACZ92_14610 | ACZ92_00910 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.804 |
| KOH19453.1 | rpmD | ACZ92_14610 | ACZ92_14655 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KOH19453.1 | rpsA | ACZ92_14610 | ACZ92_18380 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| KOH19453.1 | rpsE | ACZ92_14610 | ACZ92_14650 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
| KOH19453.1 | rpsG | ACZ92_14610 | ACZ92_07880 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
| KOH19453.1 | rpsK | ACZ92_14610 | ACZ92_14680 | 30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
