Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KOH21550.1Protein RnfH; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)    
Predicted Functional Partners:
KOH21551.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
KOH18189.1
Electron transporter RnfC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.960
KOH18191.1
Electron transporter RnfG; Part of membrane-bound complex hought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.941
RnfD
Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
 
 0.922
KOH18192.1
Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.898
KOH18187.1
Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 
 0.883
KOH18188.1
Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
   
 0.838
SmpB
SsrA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
KOH18622.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
KOH19266.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.585
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
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