Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KOH19672.1Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)    
Predicted Functional Partners:
KOH19673.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.719
KOH19671.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.697
KOH18315.1
Flagellar protein FlaG; Possibly involved in flagella export; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.663
yehT
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.609
KOH22582.1
Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.597
PmbA
Protein PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.578
KOH21130.1
Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.561
KOH22832.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.560
KOH17919.1
Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.555
KOH21320.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.530
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
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