Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GltB | KOH18626.1 | ACZ92_15610 | ACZ92_21300 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
| GltB | KOH18766.1 | ACZ92_15610 | ACZ92_16255 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
| GltB | KOH18768.1 | ACZ92_15610 | ACZ92_16265 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.609 |
| GltB | murD | ACZ92_15610 | ACZ92_15485 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.479 |
| KOH18315.1 | KOH18768.1 | ACZ92_19480 | ACZ92_16265 | Flagellar protein FlaG; Possibly involved in flagella export; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.638 |
| KOH18626.1 | GltB | ACZ92_21300 | ACZ92_15610 | Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
| KOH18626.1 | KOH18768.1 | ACZ92_21300 | ACZ92_16265 | Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.929 |
| KOH18626.1 | murD | ACZ92_21300 | ACZ92_15485 | Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
| KOH18683.1 | KOH18768.1 | ACZ92_21290 | ACZ92_16265 | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.662 |
| KOH18766.1 | GltB | ACZ92_16255 | ACZ92_15610 | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
| KOH18766.1 | KOH18767.1 | ACZ92_16255 | ACZ92_16260 | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| KOH18766.1 | KOH18768.1 | ACZ92_16255 | ACZ92_16265 | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.742 |
| KOH18767.1 | KOH18766.1 | ACZ92_16260 | ACZ92_16255 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| KOH18767.1 | KOH18768.1 | ACZ92_16260 | ACZ92_16265 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.682 |
| KOH18768.1 | GltB | ACZ92_16265 | ACZ92_15610 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| KOH18768.1 | KOH18315.1 | ACZ92_16265 | ACZ92_19480 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Flagellar protein FlaG; Possibly involved in flagella export; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.638 |
| KOH18768.1 | KOH18626.1 | ACZ92_16265 | ACZ92_21300 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.929 |
| KOH18768.1 | KOH18683.1 | ACZ92_16265 | ACZ92_21290 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.662 |
| KOH18768.1 | KOH18766.1 | ACZ92_16265 | ACZ92_16255 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.742 |
| KOH18768.1 | KOH18767.1 | ACZ92_16265 | ACZ92_16260 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.682 |
page 1 of 3