Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOH17776.1 | KOH17777.1 | ACZ92_16380 | ACZ92_16385 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.821 |
| KOH17776.1 | KOH17778.1 | ACZ92_16380 | ACZ92_16390 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.632 |
| KOH17776.1 | KOH17779.1 | ACZ92_16380 | ACZ92_16395 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| KOH17776.1 | KOH17780.1 | ACZ92_16380 | ACZ92_16400 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
| KOH17776.1 | KOH17781.1 | ACZ92_16380 | ACZ92_16405 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| KOH17777.1 | KOH17776.1 | ACZ92_16385 | ACZ92_16380 | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.821 |
| KOH17777.1 | KOH17778.1 | ACZ92_16385 | ACZ92_16390 | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.833 |
| KOH17777.1 | KOH17779.1 | ACZ92_16385 | ACZ92_16395 | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |
| KOH17777.1 | KOH17780.1 | ACZ92_16385 | ACZ92_16400 | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.425 |
| KOH17777.1 | KOH17781.1 | ACZ92_16385 | ACZ92_16405 | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.425 |
| KOH17777.1 | yebU | ACZ92_16385 | ACZ92_16410 | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | RNA methyltransferase RsmF; In Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.575 |
| KOH17778.1 | KOH17776.1 | ACZ92_16390 | ACZ92_16380 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.632 |
| KOH17778.1 | KOH17777.1 | ACZ92_16390 | ACZ92_16385 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.833 |
| KOH17778.1 | KOH17779.1 | ACZ92_16390 | ACZ92_16395 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.602 |
| KOH17778.1 | KOH17780.1 | ACZ92_16390 | ACZ92_16400 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
| KOH17778.1 | KOH17781.1 | ACZ92_16390 | ACZ92_16405 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| KOH17778.1 | yebU | ACZ92_16390 | ACZ92_16410 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase RsmF; In Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.443 |
| KOH17779.1 | KOH17776.1 | ACZ92_16395 | ACZ92_16380 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| KOH17779.1 | KOH17777.1 | ACZ92_16395 | ACZ92_16385 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.455 |
| KOH17779.1 | KOH17778.1 | ACZ92_16395 | ACZ92_16390 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.602 |
page 1 of 3