STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH17800.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
KOH17799.1
Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.815
tolB
Translocation protein TolB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.810
KOH24970.1
OmpA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.751
KOH24893.1
Flagellar protein MotY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.737
KOH22492.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
KOH22348.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
KOH21280.1
Outer membrane-specific lipoprotein transporter subunit LolE; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.601
KOH21282.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.597
KOH21219.1
Membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.594
ygbF
Tol-pal system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.537
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
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