Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KOH18025.1Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
KOH18024.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.951
KOH18026.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.936
KOH22588.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.755
KOH18027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.589
KOH22961.1
Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.581
KOH18347.1
Hydroxyacylglutathione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.581
KOH18028.1
Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
KOH18029.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
KOH25074.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.484
ribA-2
GTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
       0.428
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.