STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH18657.11-aminocyclopropane-1-carboxylate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)    
Predicted Functional Partners:
KOH24869.1
Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.800
KOH22943.1
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily.
     
  0.800
KOH17262.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.584
KOH24670.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.583
KOH22004.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.583
KOH21082.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.583
KOH18761.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.583
KOH17458.1
Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.583
KOH18604.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
 
     0.540
KOH18084.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.501
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
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