Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KOH18537.1Carbonic anhydrase; Catalyzes the interconversion of bicarbonate and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)    
Predicted Functional Partners:
KOH24920.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.918
KOH22890.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.918
KOH18536.1
Bicarbonate transporter BicA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.900
KOH23825.1
Anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.843
focA
Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.747
KOH21136.1
Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.704
KOH17448.1
Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.704
tet(34)
Xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
   
    0.649
KOH18247.1
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.649
KOH18534.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.637
Your Current Organism:
Vibrio parahaemolyticus
NCBI taxonomy Id: 670
Other names: ATCC 17802, Beneckea parahaemolytica, CAIM 320, CCUG 14474, CCUG 15657, CCUG 4224, CIP 75.2, DSM 10027, IFO 12711, LMG 2850, LMG:2850, NBRC 12711, NCCB 77010, NCCB 77018, NCTC 10903, NRRL B-4167, Oceanomonas parahaemolytica, Pasteurella parahaemolytica, V. parahaemolyticus
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.