| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOH18060.1 | rnc | ACZ92_18030 | ACZ92_21060 | S-adenosylmethionine tRNA ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| KOH19652.1 | rnc | ACZ92_15740 | ACZ92_21060 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.932 |
| KOH19652.1 | rplM | ACZ92_15740 | ACZ92_15395 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.965 |
| KOH19652.1 | rplQ | ACZ92_15740 | ACZ92_14695 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L17; Is a component of the macrolide binding site in the peptidyl transferase center; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.958 |
| KOH19652.1 | rplT | ACZ92_15740 | ACZ92_09825 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.976 |
| KOH19652.1 | rpmA | ACZ92_15740 | ACZ92_14900 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. | 0.969 |
| KOH19652.1 | rpmF | ACZ92_15740 | ACZ92_18515 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.939 |
| KOH19652.1 | rpmG | ACZ92_15740 | ACZ92_14200 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.950 |
| KOH19652.1 | rpsB | ACZ92_15740 | ACZ92_19775 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. | 0.953 |
| KOH19652.1 | rpsI | ACZ92_15740 | ACZ92_15400 | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.916 |
| rnc | KOH18060.1 | ACZ92_21060 | ACZ92_18030 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-adenosylmethionine tRNA ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| rnc | KOH19652.1 | ACZ92_21060 | ACZ92_15740 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.932 |
| rnc | rplM | ACZ92_21060 | ACZ92_15395 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.906 |
| rnc | rplQ | ACZ92_21060 | ACZ92_14695 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L17; Is a component of the macrolide binding site in the peptidyl transferase center; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.890 |
| rnc | rplT | ACZ92_21060 | ACZ92_09825 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.905 |
| rnc | rpmA | ACZ92_21060 | ACZ92_14900 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. | 0.893 |
| rnc | rpmF | ACZ92_21060 | ACZ92_18515 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.891 |
| rnc | rpmG | ACZ92_21060 | ACZ92_14200 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| rnc | rpsB | ACZ92_21060 | ACZ92_19775 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. | 0.894 |
| rnc | rpsI | ACZ92_21060 | ACZ92_15400 | Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.925 |
