Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM35_001021050Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
TM35_000143020
WD40 repeat-containing protein.
   
 0.532
TM35_000351460
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.509
TM35_000431820
Putative ankyrin repeat family protein.
    
  0.506
TM35_000391770
GP-PDE domain-containing protein.
    
 0.503
TM35_001051040
Uncharacterized protein.
    
 0.426
TM35_000421420
Uncharacterized protein.
    
  0.426
TM35_000451410
Uncharacterized protein.
    
 0.426
TM35_000031680
Uncharacterized protein.
    
 0.426
TM35_000161800
Ankyrin.
   
  0.423
TM35_000051790
GTPase protein.
   
  0.416
Your Current Organism:
Trypanosoma theileri
NCBI taxonomy Id: 67003
Other names: T. theileri
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