STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM35_000431680FCP1 homology domain-containing protein. (368 aa)    
Predicted Functional Partners:
TM35_000361710
Lipin.
    
 0.593
TM35_000172350
RNA polymerase-like protein.
    
 0.579
TM35_000053450
Putative DNA-directed RNA polymerase II.
    
  0.547
TM35_000091160
DNA-directed RNA polymerase II subunit 3.
    
 0.486
TM35_000032210
Putative DNA-directed RNA polymerase, alpha subunit.
    
 0.486
TM35_000112600
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.458
TM35_000044510
Spt4 domain-containing protein.
    
 0.444
TM35_000212910
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.439
TM35_000143040
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.414
TM35_000172920
Cyclin 9.
   
 
 0.412
Your Current Organism:
Trypanosoma theileri
NCBI taxonomy Id: 67003
Other names: T. theileri
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