STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM35_000172130RNA helicase. (1350 aa)    
Predicted Functional Partners:
TM35_000042800
PRP8 protein.
   
 0.939
TM35_000221210
PRP1_N domain-containing protein.
   
 0.912
TM35_000132300
Spliceosomal U5 snRNP-specific protein.
    
 0.889
TM35_000232470
Small nuclear ribonucleoprotein Sm D2.
   
 0.861
TM35_000231510
Small nuclear ribonucleoprotein.
   
 0.854
TM35_000381520
CPSF_A domain-containing protein.
   
 
 0.817
TM35_000281280
Thyroid hormone receptor interactor 4.
    
 
 0.807
TM35_000241570
Splicing factor 3B subunit 1.
   
 
 0.802
TM35_000061990
Uncharacterized protein.
    
 0.800
TM35_000332170
Putative splicing factor 3 subunit.
   
 
 0.789
Your Current Organism:
Trypanosoma theileri
NCBI taxonomy Id: 67003
Other names: T. theileri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.