Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TM35_000013620 | TM35_000034280 | A0A1X0P9H6 | A0A1X0P754 | U3 small nucleolar RNA-associated protein 19. | Periodic tryptophan protein 2. | 0.999 |
TM35_000013620 | TM35_000045120 | A0A1X0P9H6 | A0A1X0P619 | U3 small nucleolar RNA-associated protein 19. | RNA 3-terminal phosphate cyclase-like protein. | 0.997 |
TM35_000013620 | TM35_000051280 | A0A1X0P9H6 | A0A1X0P3N3 | U3 small nucleolar RNA-associated protein 19. | Putative peroxisomal targeting signal type 2 receptor. | 0.899 |
TM35_000013620 | TM35_000063660 | A0A1X0P9H6 | A0A1X0P3D2 | U3 small nucleolar RNA-associated protein 19. | U3 small nucleolar RNA-associated protein 21. | 0.999 |
TM35_000013620 | TM35_000074950 | A0A1X0P9H6 | A0A1X0P2H9 | U3 small nucleolar RNA-associated protein 19. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.977 |
TM35_000013620 | TM35_000081910 | A0A1X0P9H6 | A0A1X0P106 | U3 small nucleolar RNA-associated protein 19. | Uncharacterized protein. | 0.999 |
TM35_000013620 | TM35_000131420 | A0A1X0P9H6 | A0A1X0NX69 | U3 small nucleolar RNA-associated protein 19. | Putative histone acetyltransferase-like protein. | 0.528 |
TM35_000013620 | TM35_000211930 | A0A1X0P9H6 | A0A1X0NSC0 | U3 small nucleolar RNA-associated protein 19. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.572 |
TM35_000034280 | TM35_000013620 | A0A1X0P754 | A0A1X0P9H6 | Periodic tryptophan protein 2. | U3 small nucleolar RNA-associated protein 19. | 0.999 |
TM35_000034280 | TM35_000045120 | A0A1X0P754 | A0A1X0P619 | Periodic tryptophan protein 2. | RNA 3-terminal phosphate cyclase-like protein. | 0.998 |
TM35_000034280 | TM35_000051280 | A0A1X0P754 | A0A1X0P3N3 | Periodic tryptophan protein 2. | Putative peroxisomal targeting signal type 2 receptor. | 0.909 |
TM35_000034280 | TM35_000063660 | A0A1X0P754 | A0A1X0P3D2 | Periodic tryptophan protein 2. | U3 small nucleolar RNA-associated protein 21. | 0.999 |
TM35_000034280 | TM35_000074950 | A0A1X0P754 | A0A1X0P2H9 | Periodic tryptophan protein 2. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.999 |
TM35_000034280 | TM35_000081910 | A0A1X0P754 | A0A1X0P106 | Periodic tryptophan protein 2. | Uncharacterized protein. | 0.999 |
TM35_000034280 | TM35_000131420 | A0A1X0P754 | A0A1X0NX69 | Periodic tryptophan protein 2. | Putative histone acetyltransferase-like protein. | 0.531 |
TM35_000034280 | TM35_000211930 | A0A1X0P754 | A0A1X0NSC0 | Periodic tryptophan protein 2. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.767 |
TM35_000045120 | TM35_000013620 | A0A1X0P619 | A0A1X0P9H6 | RNA 3-terminal phosphate cyclase-like protein. | U3 small nucleolar RNA-associated protein 19. | 0.997 |
TM35_000045120 | TM35_000034280 | A0A1X0P619 | A0A1X0P754 | RNA 3-terminal phosphate cyclase-like protein. | Periodic tryptophan protein 2. | 0.998 |
TM35_000045120 | TM35_000051280 | A0A1X0P619 | A0A1X0P3N3 | RNA 3-terminal phosphate cyclase-like protein. | Putative peroxisomal targeting signal type 2 receptor. | 0.751 |
TM35_000045120 | TM35_000063660 | A0A1X0P619 | A0A1X0P3D2 | RNA 3-terminal phosphate cyclase-like protein. | U3 small nucleolar RNA-associated protein 21. | 0.997 |
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