STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM35_000083010tRNA-splicing ligase RtcB. (470 aa)    
Predicted Functional Partners:
TM35_000045120
RNA 3-terminal phosphate cyclase-like protein.
  
  
 0.890
TM35_000053580
Eukaryotic peptide chain release factor subunit 1.
  
    0.673
TM35_000073900
Ribosome-associated protein.
  
  
 0.655
TM35_000012750
Putative elongation initiation factor 2 alpha subunit.
   
  
 0.617
TM35_000025200
Eukaryotic translation initiation factor 3 subunit L.
   
    0.564
TM35_000022650
Developmentally regulated GTP-binding protein.
   
    0.564
TM35_000631220
Putative eukaryotic translation initiation factor 1A.
      
 0.541
TM35_000271530
CLP1_P domain-containing protein.
      
 0.470
TM35_000212640
C-1-tetrahydrofolate synthase, cytoplasmic.
     
 0.436
TM35_000242270
Putative elongation factor G2-like protein.
      
 0.435
Your Current Organism:
Trypanosoma theileri
NCBI taxonomy Id: 67003
Other names: T. theileri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.