STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71039.1Chorismate synthase; Pfam:pfam04978 Protein of unknown function (DUF664). (171 aa)    
Predicted Functional Partners:
ANP71040.1
Hypothetical protein.
       0.601
ANP72423.1
Pfam:pfam04978 Protein of unknown function (DUF664).
  
   
 0.532
mca
GlcNAc-PI de-N-acetylase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
   
 0.479
ANP72328.1
Pfam:pfam04978 Protein of unknown function (DUF664).
  
   
 0.471
ANP71038.1
Histidine ammonia-lyase; Pfam:pfam00221 Aromatic amino acid lyase.
       0.470
ANP72593.1
Hypothetical protein; Pfam:pfam02720 Domain of unknown function (DUF222).
  
     0.414
ANP73263.1
Hypothetical protein; Pfam:pfam02720 Domain of unknown function (DUF222).
  
     0.411
hutI
Imidazolonepropionase; Pfam:pfam13147 Amidohydrolase.
       0.406
ANP71035.1
Formiminoglutamate deiminase; Pfam:pfam01979 Amidohydrolase family.
       0.406
ANP71036.1
Allantoate amidohydrolase; Pfam:pfam01546 Peptidase family M20/M25/M40.
       0.406
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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