STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71078.1Hypothetical protein. (557 aa)    
Predicted Functional Partners:
ANP71077.1
Pfam:pfam00005 ABC transporter.
  
 0.963
ANP73301.1
Pfam:pfam01061 ABC-2 type transporter.
  
  
 0.720
ANP73300.1
Pfam:pfam00005 ABC transporter.
  
 0.543
ANP71076.1
Multidrug transporter MATE; Pfam:pfam01554 MatE.
       0.537
ANP71075.1
MFS transporter permease; Pfam:pfam07690 Major Facilitator Superfamily.
       0.497
nucS
Endonuclease NucS; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
       0.496
ANP74005.1
ABC-type multidrug transporter, ATPase component; Pfam:pfam00005 ABC transporter.
  
 0.489
ANP72252.1
Membrane protein; Pfam:pfam04191 Phospholipid methyltransferase.
  
    0.487
ANP73487.1
Glycosyl transferase family 8; Pfam:pfam00005 ABC transporter.
  
 0.446
ANP71190.1
Hypothetical protein; Pfam:pfam08940 Domain of unknown function (DUF1918).
 
     0.439
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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