STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71085.1Dehydrogenase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase. (292 aa)    
Predicted Functional Partners:
ANP71086.1
ATP-dependent DNA ligase.
       0.539
ANP72366.1
Pfam:pfam01028 Eukaryotic DNA topoisomerase I, catalytic core.
  
 
   0.510
ANP74586.1
Molecular chaperone GroES; Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
 
    0.502
ANP72628.1
ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain.
 
 
 0.441
ANP71084.1
Pfam:pfam02133 Permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
       0.436
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.