STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71179.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
ANP71180.1
Pfam:pfam07690 Major Facilitator Superfamily.
       0.613
ANP71181.1
Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.613
ANP71182.1
Hypothetical protein.
       0.613
ANP71183.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
       0.613
ANP71178.1
Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase.
       0.580
ANP71177.1
Pfam:pfam00135 Carboxylesterase family; Belongs to the type-B carboxylesterase/lipase family.
       0.476
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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