Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP71178.1 | ANP71179.1 | PA27867_0204 | PA27867_0205 | Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase. | Hypothetical protein. | 0.580 |
ANP71178.1 | ANP71180.1 | PA27867_0204 | PA27867_0206 | Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase. | Pfam:pfam07690 Major Facilitator Superfamily. | 0.468 |
ANP71178.1 | ANP71181.1 | PA27867_0204 | PA27867_0207 | Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase. | Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.469 |
ANP71178.1 | ANP71182.1 | PA27867_0204 | PA27867_0208 | Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase. | Hypothetical protein. | 0.468 |
ANP71178.1 | ANP71183.1 | PA27867_0204 | PA27867_0209 | Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.468 |
ANP71179.1 | ANP71178.1 | PA27867_0205 | PA27867_0204 | Hypothetical protein. | Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase. | 0.580 |
ANP71179.1 | ANP71180.1 | PA27867_0205 | PA27867_0206 | Hypothetical protein. | Pfam:pfam07690 Major Facilitator Superfamily. | 0.613 |
ANP71179.1 | ANP71181.1 | PA27867_0205 | PA27867_0207 | Hypothetical protein. | Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.613 |
ANP71179.1 | ANP71182.1 | PA27867_0205 | PA27867_0208 | Hypothetical protein. | Hypothetical protein. | 0.613 |
ANP71179.1 | ANP71183.1 | PA27867_0205 | PA27867_0209 | Hypothetical protein. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.613 |
ANP71180.1 | ANP71178.1 | PA27867_0206 | PA27867_0204 | Pfam:pfam07690 Major Facilitator Superfamily. | Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase. | 0.468 |
ANP71180.1 | ANP71179.1 | PA27867_0206 | PA27867_0205 | Pfam:pfam07690 Major Facilitator Superfamily. | Hypothetical protein. | 0.613 |
ANP71180.1 | ANP71181.1 | PA27867_0206 | PA27867_0207 | Pfam:pfam07690 Major Facilitator Superfamily. | Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.773 |
ANP71180.1 | ANP71182.1 | PA27867_0206 | PA27867_0208 | Pfam:pfam07690 Major Facilitator Superfamily. | Hypothetical protein. | 0.773 |
ANP71180.1 | ANP71183.1 | PA27867_0206 | PA27867_0209 | Pfam:pfam07690 Major Facilitator Superfamily. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.817 |
ANP71180.1 | ANP71184.1 | PA27867_0206 | PA27867_0210 | Pfam:pfam07690 Major Facilitator Superfamily. | CMP deaminase; Pfam:pfam00383 Cytidine and deoxycytidylate deaminase zinc-binding region. | 0.413 |
ANP71181.1 | ANP71178.1 | PA27867_0207 | PA27867_0204 | Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Flavodoxin; Pfam:pfam03358 NADPH-dependent FMN reductase. | 0.469 |
ANP71181.1 | ANP71179.1 | PA27867_0207 | PA27867_0205 | Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.613 |
ANP71181.1 | ANP71180.1 | PA27867_0207 | PA27867_0206 | Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Pfam:pfam07690 Major Facilitator Superfamily. | 0.773 |
ANP71181.1 | ANP71182.1 | PA27867_0207 | PA27867_0208 | Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.787 |
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