Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP71107.1 | ANP71223.1 | PA27867_0130 | PA27867_0249 | Hypothetical protein. | Pfam:pfam14012 Protein of unknown function (DUF4229). | 0.654 |
ANP71107.1 | ANP71607.1 | PA27867_0130 | PA27867_0638 | Hypothetical protein. | Exopolysaccharide production protein; Pfam:pfam04932 O-Antigen ligase. | 0.608 |
ANP71107.1 | ANP71608.1 | PA27867_0130 | PA27867_0639 | Hypothetical protein. | Exopolysaccharide production protein; Pfam:pfam04932 O-Antigen ligase. | 0.547 |
ANP71107.1 | ANP72969.1 | PA27867_0130 | PA27867_2017 | Hypothetical protein. | Pfam:pfam09579 Sporulation protein YtfJ (Spore_YtfJ). | 0.667 |
ANP71107.1 | ANP73944.1 | PA27867_0130 | PA27867_3008 | Hypothetical protein. | Putative integral membrane protein. | 0.744 |
ANP71107.1 | ANP74138.1 | PA27867_0130 | PA27867_3208 | Hypothetical protein. | Hypothetical protein. | 0.524 |
ANP71223.1 | ANP71107.1 | PA27867_0249 | PA27867_0130 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Hypothetical protein. | 0.654 |
ANP71223.1 | ANP71224.1 | PA27867_0249 | PA27867_0250 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Membrane protein; Pfam:pfam13396 Phospholipase_D-nuclease N-terminal. | 0.628 |
ANP71223.1 | ANP71607.1 | PA27867_0249 | PA27867_0638 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Exopolysaccharide production protein; Pfam:pfam04932 O-Antigen ligase. | 0.567 |
ANP71223.1 | ANP71608.1 | PA27867_0249 | PA27867_0639 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Exopolysaccharide production protein; Pfam:pfam04932 O-Antigen ligase. | 0.551 |
ANP71223.1 | ANP71790.1 | PA27867_0249 | PA27867_0823 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Hypothetical protein. | 0.485 |
ANP71223.1 | ANP72784.1 | PA27867_0249 | PA27867_1831 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Hypothetical protein. | 0.479 |
ANP71223.1 | ANP72969.1 | PA27867_0249 | PA27867_2017 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Pfam:pfam09579 Sporulation protein YtfJ (Spore_YtfJ). | 0.692 |
ANP71223.1 | ANP73944.1 | PA27867_0249 | PA27867_3008 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Putative integral membrane protein. | 0.602 |
ANP71223.1 | ANP74138.1 | PA27867_0249 | PA27867_3208 | Pfam:pfam14012 Protein of unknown function (DUF4229). | Hypothetical protein. | 0.479 |
ANP71223.1 | menD | PA27867_0249 | PA27867_0251 | Pfam:pfam14012 Protein of unknown function (DUF4229). | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.653 |
ANP71224.1 | ANP71223.1 | PA27867_0250 | PA27867_0249 | Membrane protein; Pfam:pfam13396 Phospholipase_D-nuclease N-terminal. | Pfam:pfam14012 Protein of unknown function (DUF4229). | 0.628 |
ANP71224.1 | menD | PA27867_0250 | PA27867_0251 | Membrane protein; Pfam:pfam13396 Phospholipase_D-nuclease N-terminal. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.812 |
ANP71607.1 | ANP71107.1 | PA27867_0638 | PA27867_0130 | Exopolysaccharide production protein; Pfam:pfam04932 O-Antigen ligase. | Hypothetical protein. | 0.608 |
ANP71607.1 | ANP71223.1 | PA27867_0638 | PA27867_0249 | Exopolysaccharide production protein; Pfam:pfam04932 O-Antigen ligase. | Pfam:pfam14012 Protein of unknown function (DUF4229). | 0.567 |
page 1 of 3