STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71259.1Pfam:pfam13472 GDSL-like Lipase/Acylhydrolase family. (250 aa)    
Predicted Functional Partners:
ANP71560.1
Pfam:pfam00534 Glycosyl transferases group 1.
 
      0.634
ANP71260.1
Hypothetical protein; Pfam:pfam13646 HEAT repeats.
       0.603
ANP73304.1
Pfam:pfam01168 Alanine racemase, N-terminal domain.
  
     0.581
ANP72622.1
3''''-5'''' exonuclease; Pfam:pfam00476 DNA polymerase family A.
  
    0.474
ANP71860.1
Membrane protein.
  
     0.460
ANP71734.1
Hypothetical protein; Pfam:pfam11706 CGNR zinc finger.
  
     0.451
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.439
ANP71838.1
Hypothetical protein.
  
 
 0.426
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.411
ANP71262.1
Metal ABC transporter permease protein; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.411
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.