STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71295.1Membrane protein; Pfam:pfam12704 MacB-like periplasmic core domain. (491 aa)    
Predicted Functional Partners:
ANP71294.1
Peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 0.955
ANP71030.1
Hypothetical protein.
   
 
 0.690
ANP72600.1
Peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 
 0.679
ANP74583.1
ABC transporter, ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 
 0.646
ANP71955.1
Pfam:pfam00005 ABC transporter.
 
 
 0.623
ANP74673.1
Pfam:pfam00005 ABC transporter.
 
 
 0.622
ANP71436.1
Putative ABC transporter.
 
 
 0.603
ANP72108.1
Pfam:pfam00005 ABC transporter.
  
 
 0.559
ANP71434.1
Hypothetical protein.
  
 
 0.542
ANP71297.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.517
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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