STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71320.1LacI family transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain. (339 aa)    
Predicted Functional Partners:
ANP72779.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
    
 
 0.628
ANP71319.1
HTH-type transcriptional regulator CelR; Pfam:pfam13377 Periplasmic binding protein-like domain.
 
    
0.612
ANP71317.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.438
ANP71318.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.438
araA
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
    
 0.429
ANP71321.1
Ribulose 5-phosphate epimerase; Pfam:pfam00596 Class II Aldolase and Adducin N-terminal domain.
     
 0.409
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.