STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71321.1Ribulose 5-phosphate epimerase; Pfam:pfam00596 Class II Aldolase and Adducin N-terminal domain. (236 aa)    
Predicted Functional Partners:
araA
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 0.992
araA-2
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 0.969
xylB
Xylulokinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain.
  
 
 0.939
ANP72791.1
Pfam:pfam00834 Ribulose-phosphate 3 epimerase family; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.913
ANP74008.1
Ribulose 5-phosphate epimerase; Pfam:pfam00596 Class II Aldolase and Adducin N-terminal domain.
  
  
 
0.900
uxaC
Pfam:pfam02614 Glucuronate isomerase.
    
 0.823
ANP71323.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam13407 Periplasmic binding protein domain.
  
  
 0.582
ANP73397.1
PTS lactose transporter subunit IIC; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
  
 0.569
ANP74210.1
ATPase; Pfam:pfam02782 FGGY family of carbohydrate kinases, C-terminal domain.
 
  
 0.527
ANP71871.1
Pfam:pfam00465 Iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.496
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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