STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71352.1Pfam:pfam02566 OsmC-like protein. (143 aa)    
Predicted Functional Partners:
ANP73776.1
Pfam:pfam01047 MarR family.
  
 0.769
ANP72152.1
Pfam:pfam01047 MarR family.
  
 0.729
ANP73205.1
Trehalose-phosphatase; Pfam:pfam00982 Glycosyltransferase family 20.
   
    0.727
ANP73229.1
Pfam:pfam01047 MarR family.
  
 0.695
ANP71353.1
Pfam:pfam01047 MarR family.
  
    0.551
ANP71351.1
Hypothetical protein.
       0.539
ANP74652.1
DNA-binding protein; Pfam:pfam00210 Ferritin-like domain; Belongs to the Dps family.
  
  
 0.507
ANP73189.1
NADP-dependent oxidoreductase; Pfam:pfam00107 Zinc-binding dehydrogenase.
 
    0.493
ANP71354.1
Acetyltransferase family protein; Pfam:pfam14542 GCN5-related N-acetyl-transferase.
  
    0.429
ANP71704.1
Catalase; Pfam:pfam00199 Catalase; Belongs to the catalase family.
  
  
 0.424
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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