STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71362.1Hypothetical protein; Pfam:pfam13462 Thioredoxin. (282 aa)    
Predicted Functional Partners:
ANP72907.1
Membrane protein; Pfam:pfam07884 Vitamin K epoxide reductase family.
 
  
 0.577
ANP71865.1
Putative hydrolase; Pfam:pfam10103 Uncharacterized conserved protein (DUF2342).
  
     0.556
ANP72673.1
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.543
ANP71361.1
Hypothetical protein; Pfam:pfam05495 CHY zinc finger.
       0.501
ANP72832.1
Pfam:pfam02699 Preprotein translocase subunit.
  
    0.492
ANP71484.1
Pfam:pfam14029 Protein of unknown function (DUF4244).
  
     0.471
ANP73000.1
DivIVA domain repeat protein.
  
     0.462
ANP72994.1
Hypothetical protein.
  
     0.459
ANP73424.1
Pfam:pfam12270 Cytochrome c oxidase subunit IV.
  
     0.459
ANP71209.1
Alkyl hydroperoxide reductase; Pfam:pfam00578 AhpC/TSA family.
  
 
 0.455
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.