Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP71415.1 | ANP71417.1 | PA27867_0444 | PA27867_0446 | Pfam:pfam13177 DNA polymerase III, delta subunit. | Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. | 0.471 |
ANP71415.1 | recR | PA27867_0444 | PA27867_0445 | Pfam:pfam13177 DNA polymerase III, delta subunit. | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.933 |
ANP71417.1 | ANP71415.1 | PA27867_0446 | PA27867_0444 | Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. | Pfam:pfam13177 DNA polymerase III, delta subunit. | 0.471 |
ANP71417.1 | ANP71418.1 | PA27867_0446 | PA27867_0447 | Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. | Serine hydrolase; Pfam:pfam00144 Beta-lactamase. | 0.699 |
ANP71417.1 | ANP71419.1 | PA27867_0446 | PA27867_0448 | Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. | Hypothetical protein. | 0.444 |
ANP71417.1 | recR | PA27867_0446 | PA27867_0445 | Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.472 |
ANP71418.1 | ANP71417.1 | PA27867_0447 | PA27867_0446 | Serine hydrolase; Pfam:pfam00144 Beta-lactamase. | Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. | 0.699 |
ANP71418.1 | ANP71419.1 | PA27867_0447 | PA27867_0448 | Serine hydrolase; Pfam:pfam00144 Beta-lactamase. | Hypothetical protein. | 0.773 |
ANP71419.1 | ANP71417.1 | PA27867_0448 | PA27867_0446 | Hypothetical protein. | Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. | 0.444 |
ANP71419.1 | ANP71418.1 | PA27867_0448 | PA27867_0447 | Hypothetical protein. | Serine hydrolase; Pfam:pfam00144 Beta-lactamase. | 0.773 |
recR | ANP71415.1 | PA27867_0445 | PA27867_0444 | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Pfam:pfam13177 DNA polymerase III, delta subunit. | 0.933 |
recR | ANP71417.1 | PA27867_0445 | PA27867_0446 | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. | 0.472 |