Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP71501.1 | ANP71502.1 | PA27867_0532 | PA27867_0533 | Lipoprotein; Pfam:pfam14344 Domain of unknown function (DUF4397). | Putative secreted protein; Pfam:pfam04203 Sortase family. | 0.932 |
ANP71501.1 | ANP71503.1 | PA27867_0532 | PA27867_0534 | Lipoprotein; Pfam:pfam14344 Domain of unknown function (DUF4397). | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.835 |
ANP71501.1 | ANP71504.1 | PA27867_0532 | PA27867_0535 | Lipoprotein; Pfam:pfam14344 Domain of unknown function (DUF4397). | Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.898 |
ANP71502.1 | ANP71501.1 | PA27867_0533 | PA27867_0532 | Putative secreted protein; Pfam:pfam04203 Sortase family. | Lipoprotein; Pfam:pfam14344 Domain of unknown function (DUF4397). | 0.932 |
ANP71502.1 | ANP71503.1 | PA27867_0533 | PA27867_0534 | Putative secreted protein; Pfam:pfam04203 Sortase family. | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.755 |
ANP71502.1 | ANP71504.1 | PA27867_0533 | PA27867_0535 | Putative secreted protein; Pfam:pfam04203 Sortase family. | Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.916 |
ANP71503.1 | ANP71501.1 | PA27867_0534 | PA27867_0532 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | Lipoprotein; Pfam:pfam14344 Domain of unknown function (DUF4397). | 0.835 |
ANP71503.1 | ANP71502.1 | PA27867_0534 | PA27867_0533 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | Putative secreted protein; Pfam:pfam04203 Sortase family. | 0.755 |
ANP71503.1 | ANP71504.1 | PA27867_0534 | PA27867_0535 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.932 |
ANP71503.1 | ANP71505.1 | PA27867_0534 | PA27867_0536 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.565 |
ANP71503.1 | ANP71659.1 | PA27867_0534 | PA27867_0692 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor RpoE; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.758 |
ANP71503.1 | ANP73233.1 | PA27867_0534 | PA27867_2282 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.447 |
ANP71503.1 | ANP73766.1 | PA27867_0534 | PA27867_2828 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.850 |
ANP71503.1 | ANP74681.1 | PA27867_0534 | PA27867_3766 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.786 |
ANP71503.1 | rpoB | PA27867_0534 | PA27867_3023 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.430 |
ANP71503.1 | rpoC | PA27867_0534 | PA27867_3022 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase subunit beta'''; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.464 |
ANP71504.1 | ANP71501.1 | PA27867_0535 | PA27867_0532 | Pfam:pfam10099 Anti-sigma-K factor rskA. | Lipoprotein; Pfam:pfam14344 Domain of unknown function (DUF4397). | 0.898 |
ANP71504.1 | ANP71502.1 | PA27867_0535 | PA27867_0533 | Pfam:pfam10099 Anti-sigma-K factor rskA. | Putative secreted protein; Pfam:pfam04203 Sortase family. | 0.916 |
ANP71504.1 | ANP71503.1 | PA27867_0535 | PA27867_0534 | Pfam:pfam10099 Anti-sigma-K factor rskA. | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.932 |
ANP71504.1 | ANP71505.1 | PA27867_0535 | PA27867_0536 | Pfam:pfam10099 Anti-sigma-K factor rskA. | Hypothetical protein. | 0.565 |
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