STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71562.1Pfam:pfam02608 Basic membrane protein. (366 aa)    
Predicted Functional Partners:
ANP71563.1
Pfam:pfam00005 ABC transporter.
 
 
 0.994
ANP71565.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
ANP71564.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.988
ANP71567.1
Pyrimidine-nucleoside phosphorylase; Pfam:pfam00591 Glycosyl transferase family, a/b domain.
 
   
 0.778
ANP71566.1
Pfam:pfam00383 Cytidine and deoxycytidylate deaminase zinc-binding region.
 
   
 0.759
ANP71561.1
Mannose-1-phosphate guanylyltransferase; Pfam:pfam00483 Nucleotidyl transferase.
       0.609
ANP72009.1
ABC sugar transporter, ATP-binding component; Pfam:pfam00005 ABC transporter.
 
     0.494
ANP72204.1
Pfam:pfam00005 ABC transporter.
 
     0.474
ANP71445.1
Pfam:pfam00265 Thymidine kinase.
 
     0.436
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.417
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.