STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71602.1Pfam:pfam01061 ABC-2 type transporter. (290 aa)    
Predicted Functional Partners:
ANP71601.1
Pfam:pfam00005 ABC transporter.
 
 
 0.994
ANP71897.1
Pfam:pfam00005 ABC transporter.
 
 
 0.976
ANP71598.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
  
 0.857
ANP71603.1
Pfam:pfam13641 Glycosyltransferase like family 2.
 
  
 0.848
ANP71604.1
Pfam:pfam03275 UDP-galactopyranose mutase.
  
  
 0.798
ANP71898.1
Pfam:pfam01061 ABC-2 type transporter.
  
  
 
0.526
ANP73906.1
Hypothetical protein; Pfam:pfam00535 Glycosyl transferase family 2.
 
  
 0.499
ANP74091.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
  
 0.497
ANP71599.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
  
 0.473
ANP72140.1
Amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
    
  0.402
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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