STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71667.1Membrane protein; Pfam:pfam01595 Domain of unknown function DUF21. (465 aa)    
Predicted Functional Partners:
ANP71668.1
Membrane protein; Pfam:pfam01595 Domain of unknown function DUF21.
 
   
0.919
ANP74282.1
CBS domain-containing protein; Pfam:pfam01595 Domain of unknown function DUF21.
 
   
0.664
ANP71666.1
Inosine 5''''-monophosphate dehydrogenase; Pfam:pfam00478 IMP dehydrogenase / GMP reductase domain.
  
    0.598
ANP71665.1
Alpha-ketoglutarate decarboxylase; Pfam:pfam00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain).
  
    0.477
ANP74073.1
Hypothetical protein; Pfam:pfam03703 Bacterial PH domain.
 
    0.429
ybeY
Heat-shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.404
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
    0.403
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.