STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71728.1Multidrug DMT transporter permease. (321 aa)    
Predicted Functional Partners:
ANP72620.1
Pfam:pfam00534 Glycosyl transferases group 1.
     0.947
ANP73288.1
Hypothetical protein.
  
     0.707
ANP72994.1
Hypothetical protein.
  
     0.651
ANP71727.1
Hypothetical protein.
 
     0.640
ANP74138.1
Hypothetical protein.
  
     0.617
ANP72784.1
Hypothetical protein.
  
     0.589
ANP72734.1
Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family.
  
    0.560
ANP71865.1
Putative hydrolase; Pfam:pfam10103 Uncharacterized conserved protein (DUF2342).
  
     0.524
glgB
Glycogen-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.524
ANP73731.1
Hypothetical protein; Pfam:pfam13399 LytR cell envelope-related transcriptional attenuator.
  
     0.517
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.