STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71809.1AsnC family transcriptional regulator; Pfam:pfam13404 AsnC-type helix-turn-helix domain. (160 aa)    
Predicted Functional Partners:
ANP71808.1
Adenosylmethionine-8-amino-7-oxononanoate transaminase; Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.969
ANP71391.1
Pfam:pfam01266 FAD dependent oxidoreductase.
 
    0.725
ANP73359.1
Pfam:pfam01037 AsnC family.
  
     0.713
ANP72726.1
Transcriptional regulator; Pfam:pfam01037 AsnC family.
  
     0.688
ANP74033.1
Putative AsnC family transcriptional regulator; Pfam:pfam13404 AsnC-type helix-turn-helix domain.
  
     0.624
ANP73922.1
Fis family transcriptional regulator; Pfam:pfam13412 Winged helix-turn-helix DNA-binding.
  
     0.615
ANP71133.1
AsnC family transcriptional regulator; Pfam:pfam13404 AsnC-type helix-turn-helix domain.
  
     0.577
ANP71820.1
Polyamine ABC transporter substrate-binding lipoprotein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
     0.548
ANP71810.1
Hypothetical protein; Pfam:pfam00498 FHA domain.
       0.528
ANP72090.1
Pfam:pfam01037 AsnC family.
  
     0.528
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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