STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71833.1Pfam:pfam08327 Activator of Hsp90 ATPase-like protein. (176 aa)    
Predicted Functional Partners:
ANP71834.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
    0.993
ANP74343.1
Hypothetical protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
  
     0.723
ANP71835.1
Pfam:pfam01553 Acyltransferase.
       0.581
ANP72212.1
Hypothetical protein; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family.
      0.457
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.432
ANP74465.1
DNA alkylation repair protein.
  
     0.420
ANP71025.1
Streptomycin kinase; Pfam:pfam04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase.
 
     0.403
ANP72241.1
Putative ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
 
    0.400
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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