STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71838.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
ANP71839.1
Pfam:pfam00069 Protein kinase domain.
     
 0.779
ANP71840.1
Peptidase; Pfam:pfam02163 Peptidase family M50.
       0.555
ANP71837.1
Hypothetical protein; Pfam:pfam13460 NADH(P)-binding.
  
    0.550
ANP71767.1
Hypothetical protein.
  
    0.507
ANP74020.1
Hypothetical protein.
  
    0.507
ANP74104.1
Hypothetical protein; Pfam:pfam13313 Domain of unknown function (DUF4082).
  
    0.507
ANP74561.1
Hypothetical protein; Pfam:pfam00188 Cysteine-rich secretory protein family.
  
    0.507
ANP71429.1
Putative cellobiohydrolase; Pfam:pfam01341 Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6.
  
 
 0.480
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
     
 0.456
ANP71842.1
LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
  
  
 0.429
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.