STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72204.1Pfam:pfam00005 ABC transporter. (513 aa)    
Predicted Functional Partners:
ANP74263.1
Sugar ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.982
ANP74594.1
Sugar ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.979
ANP72203.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam13407 Periplasmic binding protein domain.
 
 0.975
ANP72205.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.970
ANP72010.1
ABC sugar transporter, permease component; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.963
ANP72009.1
ABC sugar transporter, ATP-binding component; Pfam:pfam00005 ABC transporter.
  
  
 
0.919
ANP74264.1
Pfam:pfam00005 ABC transporter.
  
  
 
0.911
ANP74262.1
ABC transporter substrate-binding protein; Pfam:pfam13407 Periplasmic binding protein domain.
 0.909
ANP74361.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.888
ANP72011.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam13407 Periplasmic binding protein domain.
  
 0.871
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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