STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72230.1Transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain. (352 aa)    
Predicted Functional Partners:
ANP72313.1
Putative transcriptional regulator; Pfam:pfam00532 Periplasmic binding proteins and sugar binding domain of LacI family.
  
     0.775
ANP73478.1
Transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain.
  
     0.766
ANP72779.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
    
 
 0.628
ANP72228.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
       0.503
ANP72229.1
Hypothetical protein; Pfam:pfam06283 Trehalose utilisation.
       0.503
ANP72231.1
Phosphoglycerate mutase; Pfam:pfam00300 Histidine phosphatase superfamily (branch 1).
       0.465
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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