STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72252.1Membrane protein; Pfam:pfam04191 Phospholipid methyltransferase. (302 aa)    
Predicted Functional Partners:
ANP72253.1
Lysine transporter LysE; Pfam:pfam01810 LysE type translocator.
       0.651
ANP72254.1
Pfam:pfam03551 Transcriptional regulator PadR-like family.
 
     0.544
ANP71078.1
Hypothetical protein.
  
    0.487
ANP73823.1
Hypothetical protein; Pfam:pfam13515 Fusaric acid resistance protein-like.
  
     0.466
ANP73913.1
Hypothetical protein; Pfam:pfam11790 Glycosyl hydrolase catalytic core.
  
    0.460
ANP71696.1
Pfam:pfam03575 Peptidase family S51; Belongs to the peptidase S51 family.
 
     0.444
ANP71161.1
Hypothetical protein; Pfam:pfam12671 Putative amidase domain.
  
     0.433
ANP74394.1
3,4-dioxygenase subunit beta; Pfam:pfam00775 Dioxygenase.
  
     0.429
rpsM
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.426
ANP71160.1
Hypothetical protein; Pfam:pfam12671 Putative amidase domain.
  
     0.415
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.