STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72267.1Pfam:pfam00454 Phosphatidylinositol 3- and 4-kinase. (255 aa)    
Predicted Functional Partners:
ANP72266.1
Pfam:pfam11290 Protein of unknown function (DUF3090).
 
    0.963
ANP72265.1
Pfam:pfam00300 Histidine phosphatase superfamily (branch 1).
 
     0.960
ANP72025.1
Helicase; Pfam:pfam00176 SNF2 family N-terminal domain.
   
 0.694
ANP73413.1
Helicase; Pfam:pfam00176 SNF2 family N-terminal domain.
   
 0.694
ANP74408.1
Putative helicase; Pfam:pfam00176 SNF2 family N-terminal domain.
   
 0.694
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
    
   0.670
ANP72263.1
Glyoxalase; Pfam:pfam12681 Glyoxalase-like domain.
 
     0.604
ANP71854.1
Uridine kinase family protein.
   
 0.603
ANP72965.1
ATP-binding protein; Pfam:pfam13207 AAA domain.
   
 0.603
ANP72268.1
Peptide chain release factor 1; Pfam:pfam00472 RF-1 domain.
       0.564
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.