STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72275.1Hypothetical protein; Pfam:pfam07690 Major Facilitator Superfamily. (424 aa)    
Predicted Functional Partners:
ANP73463.1
Hypothetical protein; Pfam:pfam01814 Hemerythrin HHE cation binding domain.
 
     0.557
ANP73507.1
Hypothetical protein.
  
     0.557
ANP74676.1
Pfam:pfam12710 haloacid dehalogenase-like hydrolase.
  
     0.503
ANP72274.1
Putative flavodoxin.
       0.488
ANP72276.1
Hypothetical protein.
       0.488
ANP72166.1
Pfam:pfam06772 Bacterial low temperature requirement A protein (LtrA).
  
     0.478
ANP72180.1
Hypothetical protein; Pfam:pfam06772 Bacterial low temperature requirement A protein (LtrA).
  
     0.460
ANP72617.1
Two-component system sensor protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.436
ANP74056.1
Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
  
     0.419
ANP72215.1
Membrane protein; Pfam:pfam06772 Bacterial low temperature requirement A protein (LtrA).
  
     0.406
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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